STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176615_01829Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_900176615_01830
Unannotated protein.
       0.727
GCA_900176615_01102
Unannotated protein.
  
     0.653
GCA_900176615_00750
Unannotated protein.
  
     0.549
GCA_900176615_01828
Unannotated protein.
       0.536
GCA_900176615_01827
Unannotated protein.
       0.502
GCA_900176615_01832
Unannotated protein.
       0.473
GCA_900176615_01833
Unannotated protein.
       0.473
GCA_900176615_01834
Unannotated protein.
       0.473
GCA_900176615_01835
Unannotated protein.
       0.473
GCA_900176615_00806
Unannotated protein.
    
  0.465
Your Current Organism:
Clostridium massiliodielmoense
NCBI taxonomy Id: 1776385
Other names: C. massiliodielmoense, CCUG 69893, CSUR P2255, Clostridium sp. MT26, strain MT26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.