STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900088125_01683Unannotated protein. (510 aa)    
Predicted Functional Partners:
GCA_900088125_01119
Unannotated protein.
 
0.989
GCA_900088125_01457
Unannotated protein.
 
 
0.983
GCA_900088125_01459
Unannotated protein.
 
 0.955
GCA_900088125_00042
Unannotated protein.
 
 
 0.947
GCA_900088125_01456
Unannotated protein.
 
 
 0.936
GCA_900088125_01455
Unannotated protein.
  
 0.878
GCA_900088125_00380
Unannotated protein.
 
 
 0.875
GCA_900088125_01688
Unannotated protein.
  
  
 0.859
GCA_900088125_01299
Unannotated protein.
 
 
 0.842
GCA_900088125_01011
Unannotated protein.
 
 
 0.832
Your Current Organism:
Peptoniphilus pacaensis
NCBI taxonomy Id: 1776390
Other names: CSUR:P2270, DSM:101839, P. pacaensis, Peptoniphilus sp. KHD5, strain KHD5, strain Kh-D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.