STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900106845_00025Unannotated protein. (196 aa)    
Predicted Functional Partners:
GCA_900106845_00638
Unannotated protein.
   
 0.904
GCA_900106845_00977
Unannotated protein.
   
 0.904
GCA_900106845_00026
Unannotated protein.
 
     0.901
GCA_900106845_02713
Unannotated protein.
 
   
 0.863
GCA_900106845_00023
Unannotated protein.
 
 
 0.813
GCA_900106845_02711
Unannotated protein.
 
   
 0.803
GCA_900106845_00027
Unannotated protein.
       0.758
GCA_900106845_02712
Unannotated protein.
 
  
 0.732
GCA_900106845_02178
Unannotated protein.
 
 
 0.719
GCA_900106845_02180
Unannotated protein.
 
   
 0.699
Your Current Organism:
Romboutsia timonensis
NCBI taxonomy Id: 1776391
Other names: CSUR P326, R. timonensis, Romboutsia sp. DR1, strain DR1, strain Marseille-P326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.