STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900106845_00919Unannotated protein. (270 aa)    
Predicted Functional Partners:
GCA_900106845_00918
Unannotated protein.
 
    0.910
GCA_900106845_00916
Unannotated protein.
 
    0.859
GCA_900106845_00920
Unannotated protein.
  
  
 0.797
GCA_900106845_02684
Unannotated protein.
      0.731
GCA_900106845_00226
Unannotated protein.
   
  
 0.695
GCA_900106845_00912
Unannotated protein.
 
    0.661
GCA_900106845_00921
Unannotated protein.
       0.642
GCA_900106845_00911
Unannotated protein.
 
    0.617
GCA_900106845_00914
Unannotated protein.
  
    0.605
GCA_900106845_00915
Unannotated protein.
  
    0.605
Your Current Organism:
Romboutsia timonensis
NCBI taxonomy Id: 1776391
Other names: CSUR P326, R. timonensis, Romboutsia sp. DR1, strain DR1, strain Marseille-P326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.