STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900106845_00930Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_900106845_00931
Unannotated protein.
  
    0.794
GCA_900106845_00932
Unannotated protein.
       0.793
GCA_900106845_00933
Unannotated protein.
       0.763
GCA_900106845_00928
Unannotated protein.
       0.728
GCA_900106845_00929
Unannotated protein.
       0.728
GCA_900106845_00934
Unannotated protein.
       0.721
GCA_900106845_00925
Unannotated protein.
       0.680
GCA_900106845_00922
Unannotated protein.
     
 0.677
GCA_900106845_00924
Unannotated protein.
       0.666
GCA_900106845_00927
Unannotated protein.
       0.632
Your Current Organism:
Romboutsia timonensis
NCBI taxonomy Id: 1776391
Other names: CSUR P326, R. timonensis, Romboutsia sp. DR1, strain DR1, strain Marseille-P326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.