STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_00309Unannotated protein. (811 aa)    
Predicted Functional Partners:
GCA_900120365_00639
Unannotated protein.
 
  
 0.869
GCA_900120365_01241
Unannotated protein.
  
  
 0.794
GCA_900120365_00020
Unannotated protein.
 
  
  0.791
GCA_900120365_01326
Unannotated protein.
     
 0.759
GCA_900120365_01334
Unannotated protein.
    
  0.756
GCA_900120365_00103
Unannotated protein.
    
  0.748
GCA_900120365_00337
Unannotated protein.
 
  
 0.719
GCA_900120365_00119
Unannotated protein.
   
 
 0.707
GCA_900120365_00581
Unannotated protein.
 
  
 0.617
GCA_900120365_00662
Unannotated protein.
 
   
 0.610
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.