STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_00575Unannotated protein. (401 aa)    
Predicted Functional Partners:
GCA_900120365_00573
Unannotated protein.
       0.775
GCA_900120365_00574
Unannotated protein.
       0.775
GCA_900120365_00572
Unannotated protein.
       0.774
GCA_900120365_00576
Unannotated protein.
       0.749
GCA_900120365_00577
Unannotated protein.
       0.737
GCA_900120365_00570
Unannotated protein.
       0.658
GCA_900120365_00571
Unannotated protein.
       0.658
GCA_900120365_00569
Unannotated protein.
       0.592
GCA_900120365_00578
Unannotated protein.
       0.464
GCA_900120365_00579
Unannotated protein.
       0.464
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.