STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_00909Unannotated protein. (151 aa)    
Predicted Functional Partners:
GCA_900120365_00907
Unannotated protein.
 
 
 0.984
GCA_900120365_00908
Unannotated protein.
 
 
 0.971
GCA_900120365_00182
Unannotated protein.
  
 
 0.954
GCA_900120365_00910
Unannotated protein.
  
 
 0.887
GCA_900120365_00912
Unannotated protein.
 
 
  0.878
GCA_900120365_00925
Unannotated protein.
 
 
 0.813
GCA_900120365_00921
Unannotated protein.
 
 
 0.810
GCA_900120365_00923
Unannotated protein.
 
 
 0.797
GCA_900120365_00924
Unannotated protein.
 
 
 0.776
GCA_900120365_00523
Unannotated protein.
  
 
 0.761
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.