STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_01100Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_900120365_01101
Unannotated protein.
  
 0.922
GCA_900120365_01102
Unannotated protein.
     
 0.745
GCA_900120365_00508
Unannotated protein.
  
     0.658
GCA_900120365_00629
Unannotated protein.
  
     0.651
GCA_900120365_01084
Unannotated protein.
  
    0.606
GCA_900120365_00650
Unannotated protein.
  
  
 0.560
GCA_900120365_00335
Unannotated protein.
  
     0.557
GCA_900120365_00609
Unannotated protein.
   
    0.513
GCA_900120365_00740
Unannotated protein.
   
    0.513
GCA_900120365_00832
Unannotated protein.
   
    0.513
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.