STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120365_01101Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_900120365_01100
Unannotated protein.
  
 0.922
GCA_900120365_01102
Unannotated protein.
     
 0.791
GCA_900120365_00182
Unannotated protein.
  
  
 0.692
GCA_900120365_00909
Unannotated protein.
  
  
 0.647
GCA_900120365_01056
Unannotated protein.
    
  0.588
GCA_900120365_00700
Unannotated protein.
 
  
 0.518
GCA_900120365_00108
Unannotated protein.
 
   
 0.495
GCA_900120365_01103
Unannotated protein.
  
    0.472
B5E75_06375
Unannotated protein.
     
 0.425
Your Current Organism:
Massilimicrobiota timonensis
NCBI taxonomy Id: 1776392
Other names: CSUR P2264, Candidatus Stoquefichus sp. SN16, DSM 101840, M. timonensis, Massiliomicrobiota timonensis, strain Marseille-P2264, strain SN16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.