STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N3C_1765Divergent AAA domain protein. (384 aa)    
Predicted Functional Partners:
cotI_3
Spore coat protein I.
  
     0.705
N3C_1253
Hypothetical protein.
  
     0.694
gerAC_2
Spore germination protein A3 precursor.
 
     0.692
N3C_1766
Hypothetical protein.
       0.679
cotI_5
Spore coat protein I.
  
     0.677
cotI_4
Spore coat protein I.
  
     0.668
cotI_1
Spore coat protein I.
  
     0.660
cotI_2
Spore coat protein I.
  
     0.644
gerBA_3
Spore germination protein B1.
       0.641
N3C_1059
Hypothetical protein.
  
     0.639
Your Current Organism:
Clostridium sp. N3C
NCBI taxonomy Id: 1776758
Other names: C. sp. N3C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.