STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV72607.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
ORV60380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.795
ORV59956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.795
ORV68623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.788
ORV65855.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.786
ORV72608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.740
ORV65854.1
Peptidase C40; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.684
ORV74742.1
Inv protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.673
ORV68147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.667
ORV59990.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.667
leuS
leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.650
Your Current Organism:
Mycobacterium gastri
NCBI taxonomy Id: 1777
Other names: ATCC 15754, CCUG 20995, CIP 104530, DSM 43505, JCM 12407, M. gastri
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.