STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV62980.1NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
dkgA
2,5-diketo-D-gluconic acid reductase; Methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.672
ORV61058.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.581
ORV62981.1
1,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
ORV62979.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.567
ORV60091.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.557
ORV71899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.496
ORV71903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.496
ORV67348.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.496
ORV67358.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.496
ORV65917.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
0.496
Your Current Organism:
Mycobacterium gastri
NCBI taxonomy Id: 1777
Other names: ATCC 15754, CCUG 20995, CIP 104530, DSM 43505, JCM 12407, M. gastri
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