STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV60689.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
ORV60688.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ORV80148.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.988
ORV70129.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
ORV66119.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
ORV67424.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.941
ORV65839.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.940
ORV75092.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.929
ORV74240.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.926
ORV65366.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.918
ORV63745.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.917
Your Current Organism:
Mycobacterium gastri
NCBI taxonomy Id: 1777
Other names: ATCC 15754, CCUG 20995, CIP 104530, DSM 43505, JCM 12407, M. gastri
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