STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV79548.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (412 aa)    
Predicted Functional Partners:
ORV69431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.978
ORV71900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.974
ORV80390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.971
ORV67357.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.964
ORV67359.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.964
ORV60371.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.948
ORV60091.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.914
ORV61058.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.900
ORV67384.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.896
AWC07_24785
Polyketide synthase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
Your Current Organism:
Mycobacterium gastri
NCBI taxonomy Id: 1777
Other names: ATCC 15754, CCUG 20995, CIP 104530, DSM 43505, JCM 12407, M. gastri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.