STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV74683.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (335 aa)    
Predicted Functional Partners:
ORV75565.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
dkgA
2,5-diketo-D-gluconic acid reductase; Methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.883
ORV74682.1
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.867
ORV74684.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ORV74685.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
ORV71172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.690
ORV72624.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.686
ORV72633.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.652
ORV74636.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.652
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
   0.608
Your Current Organism:
Mycobacterium gastri
NCBI taxonomy Id: 1777
Other names: ATCC 15754, CCUG 20995, CIP 104530, DSM 43505, JCM 12407, M. gastri
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