STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI75533.1Pseudouridine synthase. (191 aa)    
Predicted Functional Partners:
CVI84121.1
GTP-binding protein EngA.
 
  
 0.758
CVI80379.1
Cytidylate kinase.
 
  
 0.731
CVI80236.1
RluA family pseudouridine synthase.
   
 0.610
CVI84089.1
RluA family pseudouridine synthase.
 
 
 0.606
CVI84313.1
Segregation and condensation protein B.
  
  
 0.588
CVI75534.1
Isocitrate dehydrogenase.
       0.582
CVI74701.1
Exodeoxyribonuclease III Xth.
  
    0.576
CVI76258.1
Exodeoxyribonuclease III Xth.
  
    0.576
CVI81134.1
Exodeoxyribonuclease III.
  
    0.576
CVI79597.1
Transketolase, central region.
 
  
  0.524
Your Current Organism:
Caballeronia concitans
NCBI taxonomy Id: 1777133
Other names: Burkholderia concitans, Burkholderia concitans Peeters et al. 2016, Burkholderia sp. LMG 29315, C. concitans, CCUG 68414, Caballeronia concitans (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29315, LMG:29315, strain AU12121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.