STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI83711.150S ribosomal protein L10. (164 aa)    
Predicted Functional Partners:
CVI75209.1
50S ribosomal protein L13.
  
 0.999
CVI75211.1
30S ribosomal protein S9.
  
 
 0.999
CVI75565.1
50S ribosomal protein L33.
  
 
 0.999
CVI80016.1
50S ribosomal protein L9.
  
 
 0.999
CVI80017.1
30S ribosomal protein S18.
  
 
 0.999
CVI80022.1
30S ribosomal protein S6.
  
 
 0.999
CVI80328.1
50S ribosomal protein L19.
 
 
 0.999
CVI80377.1
30S ribosomal protein S1.
   
 0.999
CVI81939.1
50S ribosomal protein L21.
  
 
 0.999
CVI82739.1
30S ribosomal protein S15.
 
 0.999
Your Current Organism:
Caballeronia concitans
NCBI taxonomy Id: 1777133
Other names: Burkholderia concitans, Burkholderia concitans Peeters et al. 2016, Burkholderia sp. LMG 29315, C. concitans, CCUG 68414, Caballeronia concitans (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29315, LMG:29315, strain AU12121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.