STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI84195.1BadM/Rrf2 family transcriptional regulator. (166 aa)    
Predicted Functional Partners:
CVI78625.1
Aminotransferase, class V.
  
 
 0.823
CVI84276.1
Cysteine desulfurase.
  
 
 0.823
CVI84278.1
Scaffold protein.
  
 
 0.820
CVI78641.1
Flavohemoprotein.
 
   
 0.745
CVI84196.1
Globin.
 
    0.605
CVI74284.1
Flagellar motor switch protein G.
    
   0.575
CVI74958.1
Molybdopterin biosynthesis protein MoeB.
    
  0.523
CVI79271.1
Hypothetical protein.
   
    0.517
CVI81296.1
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein.
 
   
 0.474
CVI84193.1
ClpB heat-shock protein.
       0.464
Your Current Organism:
Caballeronia concitans
NCBI taxonomy Id: 1777133
Other names: Burkholderia concitans, Burkholderia concitans Peeters et al. 2016, Burkholderia sp. LMG 29315, C. concitans, CCUG 68414, Caballeronia concitans (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29315, LMG:29315, strain AU12121
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.