STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI84742.1Dihydroxy-acid dehydratase. (594 aa)    
Predicted Functional Partners:
CVI82630.1
Ketol-acid reductoisomerase.
 
 
 0.946
CVI75409.1
Branched-chain amino acid aminotransferase.
  
 0.909
CVI83830.1
Glutamate synthase.
  
  
 0.889
CVI82733.1
2-isopropylmalate synthase.
 
 
 0.861
CVI74917.1
Class IV aminotransferase.
  
 0.826
CVI75890.1
Bifunctional glucokinase/RpiR family transcriptional regulator.
  
 
 0.820
CVI75024.1
2-isopropylmalate synthase.
  
 
 0.819
CVI75342.1
Para-aminobenzoate synthase subunit I.
  
 0.803
CVI82628.1
Acetolactate synthase 3 regulatory subunit.
 
 0.797
CVI82626.1
Acetolactate synthase 3 catalytic subunit.
 
 0.796
Your Current Organism:
Caballeronia concitans
NCBI taxonomy Id: 1777133
Other names: Burkholderia concitans, Burkholderia concitans Peeters et al. 2016, Burkholderia sp. LMG 29315, C. concitans, CCUG 68414, Caballeronia concitans (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29315, LMG:29315, strain AU12121
Server load: low (18%) [HD]