Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CVI97740.1 | CVI97751.1 | AWB73_00796 | AWB73_00797 | Drug resistance MFS transporter, drug:H+ antiporter-2 family; Belongs to the major facilitator superfamily. | MarR family transcriptional regulator. | 0.659 |
CVI97751.1 | CVI97740.1 | AWB73_00797 | AWB73_00796 | MarR family transcriptional regulator. | Drug resistance MFS transporter, drug:H+ antiporter-2 family; Belongs to the major facilitator superfamily. | 0.659 |
CVI97751.1 | CVI97766.1 | AWB73_00797 | AWB73_00798 | MarR family transcriptional regulator. | Hypothetical protein. | 0.488 |
CVI97751.1 | CVJ05490.1 | AWB73_00797 | AWB73_01358 | MarR family transcriptional regulator. | Phosphotransferase system, IIBC component. | 0.694 |
CVI97751.1 | CVJ07300.1 | AWB73_00797 | AWB73_01444 | MarR family transcriptional regulator. | PTS system N-acetylglucosamine-specific transporter subunit IIBC. | 0.694 |
CVI97766.1 | CVI97751.1 | AWB73_00798 | AWB73_00797 | Hypothetical protein. | MarR family transcriptional regulator. | 0.488 |
CVJ05490.1 | CVI97751.1 | AWB73_01358 | AWB73_00797 | Phosphotransferase system, IIBC component. | MarR family transcriptional regulator. | 0.694 |
CVJ05490.1 | CVJ07300.1 | AWB73_01358 | AWB73_01444 | Phosphotransferase system, IIBC component. | PTS system N-acetylglucosamine-specific transporter subunit IIBC. | 0.905 |
CVJ07300.1 | CVI97751.1 | AWB73_01444 | AWB73_00797 | PTS system N-acetylglucosamine-specific transporter subunit IIBC. | MarR family transcriptional regulator. | 0.694 |
CVJ07300.1 | CVJ05490.1 | AWB73_01444 | AWB73_01358 | PTS system N-acetylglucosamine-specific transporter subunit IIBC. | Phosphotransferase system, IIBC component. | 0.905 |