STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ72418.1Sugar ABC transporter substrate-binding protein. (321 aa)    
Predicted Functional Partners:
CVJ72375.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  0.969
CVJ32171.1
Multi-sensor hybrid histidine kinase.
   
 0.959
CVJ72388.1
L-arabinose transporter ATP-binding protein.
 
  0.959
CVI97460.1
Sensor kinase/response regulator fusion protein.
   
 0.956
CVJ08905.1
Multi-sensor hybrid histidine kinase.
   
 0.956
CVJ41253.1
Multi-sensor hybrid histidine kinase.
   
 0.953
CVJ51681.1
Multi-sensor hybrid histidine kinase.
   
 0.953
CVJ25998.1
Sensor protein evgS.
   
 0.951
CVI97537.1
ABC transporter.
  
  0.948
CVJ20539.1
Two component regulatory system sensor kinase.
   
 0.948
Your Current Organism:
Caballeronia turbans
NCBI taxonomy Id: 1777134
Other names: Burkholderia sp. LMG 29316, Burkholderia turbans, Burkholderia turbans Peeters et al. 2016, C. turbans, CCUG 68413, Caballeronia turbans (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29316, LMG:29316, strain HI4065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.