STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK59147.1Iron-containing alcohol dehydrogenase. (351 aa)    
Predicted Functional Partners:
SAK59136.1
Intradiol ring-cleavage dioxygenase.
  
 0.939
SAK45542.1
Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.841
SAK53616.1
Alcohol dehydrogenase.
    
 0.841
SAK59126.1
Rieske (2Fe-2S) domain-containing protein.
  
 
  0.815
SAK93335.1
Alcohol dehydrogenase.
  
 0.793
SAK52149.1
Alcohol dehydrogenase.
  
 0.785
SAK59845.1
Alcohol dehydrogenase.
  
 0.785
SAK47076.1
Iron-containing alcohol dehydrogenase.
  
     0.767
SAK85244.1
Intradiol ring-cleavage dioxygenase.
  
 0.766
SAK57093.1
Catechol 1,2-dioxygenase.
  
 0.757
Your Current Organism:
Caballeronia fortuita
NCBI taxonomy Id: 1777138
Other names: Burkholderia fortuita, Burkholderia fortuita Peeters et al. 2016, Burkholderia sp. LMG 29320, C. fortuita, CCUG 68409, Caballeronia fortuita (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29320, LMG:29320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.