STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK66622.1IclR family transcriptional regulator. (279 aa)    
Predicted Functional Partners:
SAK52456.1
IclR family transcriptional regulator.
  
     0.770
SAK52298.1
IclR family transcriptional regulator.
  
     0.768
SAK57076.1
IclR family transcriptional regulator.
  
     0.767
SAK68629.1
IclR family transcriptional regulator.
  
     0.767
SAK93152.1
IclR family transcriptional regulator.
  
     0.766
SAK58791.1
IclR family transcriptional regulator.
  
     0.765
SAK64720.1
IclR family transcriptional regulator.
  
     0.764
SAK48220.1
IclR family transcriptional regulator.
  
     0.761
SAK58782.1
IclR family transcriptional regulator.
  
     0.761
SAK58820.1
IclR family transcriptional regulator.
  
     0.760
Your Current Organism:
Caballeronia fortuita
NCBI taxonomy Id: 1777138
Other names: Burkholderia fortuita, Burkholderia fortuita Peeters et al. 2016, Burkholderia sp. LMG 29320, C. fortuita, CCUG 68409, Caballeronia fortuita (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29320, LMG:29320
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.