STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK46233.1Hypothetical protein. (636 aa)    
Predicted Functional Partners:
SAK46240.1
Oxidoreductase domain-containing protein.
 
  
  0.939
SAK46269.1
Hypothetical protein.
 
     0.892
rlp2_1
Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family.
 
     0.830
SAK46318.1
Sugar ABC transporter substrate-binding protein.
 
     0.826
SAK46310.1
L-arabinose transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.814
proC_2
Pyrroline-5-carboxylate reductase.
 
     0.786
SAK46246.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
SAK46251.1
ABC transporter.
       0.772
SAK53210.1
HPr kinase.
 
     0.743
rlp2_2
Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family.
 
     0.707
Your Current Organism:
Caballeronia hypogeia
NCBI taxonomy Id: 1777140
Other names: Burkholderia hypogeia, Burkholderia hypogeia Peeters et al. 2016, Burkholderia sp. LMG 29322, C. hypogeia, CCUG 68407, Caballeronia hypogeia (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29322, LMG:29322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.