STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK65369.1acetoacetyl-CoA reductase. (247 aa)    
Predicted Functional Partners:
SAK65360.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  0.826
SAK56568.1
Beta-ketoacyl synthase.
  
 0.823
SAK92054.1
Oxidoreductase FAD/NAD(P)-binding subunit; Belongs to the cytochrome P450 family.
 
 0.770
SAK97802.1
Ferredoxin; Belongs to the cytochrome P450 family.
   
 0.764
SAK85276.1
Glutamate synthase.
     
 0.731
SAK40507.1
Phosphoenolpyruvate--protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
     
 0.684
SAK45771.1
Phosphoenolpyruvate--protein phosphotransferase.
     
 0.684
SAK44256.1
Short chain dehydrogenase.
  
     0.677
SAK68579.1
Short chain dehydrogenase.
  
  
 
0.661
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.654
Your Current Organism:
Caballeronia hypogeia
NCBI taxonomy Id: 1777140
Other names: Burkholderia hypogeia, Burkholderia hypogeia Peeters et al. 2016, Burkholderia sp. LMG 29322, C. hypogeia, CCUG 68407, Caballeronia hypogeia (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29322, LMG:29322
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