STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAK86724.1Oxidoreductase domain-containing protein. (390 aa)    
Predicted Functional Partners:
SAK86719.1
Rieske (2Fe-2S) domain-containing protein.
 
  
  0.949
SAK86730.1
4,5-dihydroxyphthalate decarboxylase.
 
  
  0.904
SAK86713.1
Ferredoxin.
 
  
  0.885
SAK67952.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.756
SAK43555.1
Oxidoreductase domain-containing protein.
  
     0.733
SAK63430.1
iolD protein; Belongs to the TPP enzyme family.
 
  
 0.717
SAK63447.1
iolB protein.
 
  
 0.704
SAK63439.1
Amine catabolism-like protein.
 
 
 0.698
SAK49881.1
4-hydroxyphenylpyruvate dioxygenase.
 
 
 0.646
SAK84673.1
Xylose isomerase domain-containing protein.
 
 
  0.638
Your Current Organism:
Caballeronia hypogeia
NCBI taxonomy Id: 1777140
Other names: Burkholderia hypogeia, Burkholderia hypogeia Peeters et al. 2016, Burkholderia sp. LMG 29322, C. hypogeia, CCUG 68407, Caballeronia hypogeia (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29322, LMG:29322
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