STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVI97148.1Fimbrial protein. (177 aa)    
Predicted Functional Partners:
CVI97186.1
Fimbrial biogenesis outer membrane usher protein.
 
 0.985
CVI97166.1
Pili assembly chaperone.
 
 
 0.981
CVI97228.1
Type-1 fimbrial protein.
 
 
 0.937
CVI97204.1
Type-1 fimbrial protein subunit A.
 
  
 0.924
CVJ01172.1
Fimbrial biogenesis outer membrane usher protein.
 
 0.906
CVJ01182.1
P pilus assembly protein chaperone PapD-like protein.
 
 
 0.889
CVJ60022.1
Putative periplasmic chaperone protein.
  
 
 0.839
CVK10537.1
Membrane protein.
  
     0.590
CVJ15248.1
ImpA domain-containing protein.
  
     0.537
CVK09262.1
Voltage-gated ClC-type chloride channel ClcB.
   
    0.499
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.