STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ37214.1Cytochrome c, class I. (420 aa)    
Predicted Functional Partners:
CVK11733.1
Cytochrome c oxidase subunit III.
  
 0.993
CVK11735.1
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.993
CVK12646.1
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.993
CVK12649.1
Cytochrome c oxidase subunit I.
  
 0.993
CVK11737.1
Cytochrome c, monohem.
  
 0.991
CVK12583.1
Cytochrome c, monohem.
  
 0.991
CVK12644.1
Cytochrome c, monohem.
  
 0.991
CVK12462.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.968
CVK12464.1
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.944
CVJ37249.1
Cytochrome c.
 
 0.938
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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