STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ47566.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
CVJ47485.1
Hypothetical protein.
       0.773
CVJ47499.1
Hypothetical protein.
       0.773
CVJ47517.1
Hypothetical protein.
       0.773
CVJ47533.1
Hypothetical protein.
       0.773
CVJ47551.1
Hypothetical protein.
       0.773
CVJ47588.1
Antirestriction protein.
       0.768
CVJ47607.1
Hypothetical protein.
       0.767
CVJ47628.1
Hypothetical protein.
       0.767
CVJ47647.1
Hypothetical protein.
       0.454
CVJ47670.1
Hypothetical protein.
       0.454
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.