STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ95366.12-dehydro-3-deoxy-6-phosphogalactonate aldolase. (225 aa)    
Predicted Functional Partners:
CVJ95355.1
2-keto-3-deoxy-galactonokinase.
 
  
 0.991
glk
Bifunctional glucokinase/RpiR family transcriptional regulator; Belongs to the bacterial glucokinase family.
 
 
 0.919
CVK09314.1
Ribokinase-like domain-containing protein.
 
 
 0.891
CVK09237.1
Ribokinase-like domain-containing protein.
 
 
 0.884
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.847
CVI88729.1
Phosphoenolpyruvate--protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
    
 0.819
CVJ99306.1
Phosphoenolpyruvate--protein phosphotransferase.
    
 0.819
CVJ95344.1
IclR family transcriptional regulator.
 
   
 0.817
CVJ95378.1
Short chain dehydrogenase.
       0.811
CVJ95606.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.807
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.