STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ99810.1Substrate-binding region of ABC-type glycine betaine transport system. (293 aa)    
Predicted Functional Partners:
CVJ99842.1
Glycine betaine/L-proline ABC transporter ATPase.
 
 0.992
CVJ99821.1
Binding-protein-dependent transport system inner membrane protein.
 
 0.987
CVJ42297.1
Glycine betaine/L-proline ABC transporter ATPase.
 
 0.982
CVJ70159.1
ABC proline/glycine betaine transporter, ATPase subunit.
 
 0.982
CVK10771.1
Glycine betaine/L-proline ABC transporter ATPase.
 
 0.982
CVJ42311.1
Glycine-betaine binding ABC transporter permease.
 
 0.973
CVK10768.1
Binding-protein-dependent transport system inner membrane protein.
 
 0.973
CVJ70175.1
ABC proline/glycine betaine transporter, inner membrane subunit.
 
 0.969
CVJ42346.1
Choline ABC transporter, periplasmic binding protein.
  
  
 
0.747
CVJ42939.1
Choline ABC transporter, periplasmic binding protein.
  
  
 
0.745
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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