STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVK11538.1Major facilitator transporter. (480 aa)    
Predicted Functional Partners:
CVJ66151.1
Major facilitator transporter.
  
  
  0.772
CVK06412.1
Major facilitator transporter.
  
     0.763
CVK00964.1
Major facilitator transporter.
  
     0.754
CVK11542.1
Isopropylmalate isomerase large subunit.
       0.613
CVK10239.1
Chorismate mutase.
   
 
 0.516
CVJ48561.1
Non-ribosomal peptide synthetase.
    
 0.514
CVI92330.1
Para-aminobenzoate synthase subunit I.
   
 
 0.484
CVK09469.1
Major facilitator transporter.
  
     0.447
CVK12318.1
Major facilitator transporter.
  
     0.447
CVK11544.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.435
Your Current Organism:
Caballeronia pedi
NCBI taxonomy Id: 1777141
Other names: Burkholderia pedi, Burkholderia pedi Peeters et al. 2016, Burkholderia sp. LMG 29323, Burkholderia sp. R-52605, C. pedi, CCUG 68406, Caballeronia pedi (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29323, LMG:29323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.