STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ41702.1Major facilitator transporter. (438 aa)    
Predicted Functional Partners:
CVJ41708.1
3-ketoacyl-ACP reductase.
  
    0.470
CVJ41717.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.452
CVJ41689.1
Branched chain amino acid ABC transporter periplasmic ligand-binding protein.
       0.402
Your Current Organism:
Caballeronia glebae
NCBI taxonomy Id: 1777143
Other names: Burkholderia glebae, Burkholderia glebae Peeters et al. 2016, Burkholderia sp. LMG 22938, Burkholderia sp. LMG 29325, C. glebae, CCUG 68404, Caballeronia glebae (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29325, LMG:29325
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