STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ85229.1Branched chain amino acid ABC transporter periplasmic ligand-binding protein. (62 aa)    
Predicted Functional Partners:
CVJ10517.1
ABC transporter-like protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.944
CVI99440.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.943
CVJ06002.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.882
CVJ05993.1
Branched amino acid transport system, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.828
CVJ41675.1
Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.776
CVJ06015.1
ABC transporter.
 
 
  0.753
CVJ10501.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.752
CVJ47863.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.752
CVI98300.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.751
CVJ47850.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.751
Your Current Organism:
Caballeronia glebae
NCBI taxonomy Id: 1777143
Other names: Burkholderia glebae, Burkholderia glebae Peeters et al. 2016, Burkholderia sp. LMG 22938, Burkholderia sp. LMG 29325, C. glebae, CCUG 68404, Caballeronia glebae (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29325, LMG:29325
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