STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVJ63962.1GntR family transcriptional regulator. (257 aa)    
Predicted Functional Partners:
CVJ24568.1
GntR family transcriptional regulator.
  
     0.773
CVJ62464.1
GntR family transcriptional regulator.
  
     0.768
CVJ75329.1
GntR family transcriptional regulator.
  
     0.767
CVK08007.1
GntR family transcriptional regulator.
  
   
 0.753
CVI94642.1
Regulatory protein GntR.
  
    0.684
CVJ69428.1
GntR family transcriptional regulator.
  
    0.683
CVJ60806.1
Hypothetical protein.
  
  
 0.660
CVJ70001.1
Hypothetical protein.
  
  
 0.660
CVJ47829.1
GntR family transcriptional regulator.
  
    0.599
CVJ36114.1
GntR family transcriptional regulator.
  
    0.598
Your Current Organism:
Caballeronia ptereochthonis
NCBI taxonomy Id: 1777144
Other names: Burkholderia ptereochthonis, Burkholderia ptereochthonis Peeters et al. 2016, Burkholderia sp. LMG 29326, C. ptereochthonis, CCUG 68403, Caballeronia ptereochthonis (Peeters et al. 2016) Dobritsa et al. 2017, LMG 29326, LMG:29326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.