STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXT78668.1Putative xylanase. (176 aa)    
Predicted Functional Partners:
KXT77733.1
Putative cell-wall-anchored protein SasA (LPXTG motif).
  
  0.734
KXT77482.1
CshA protein.
  
  0.734
KXT78667.1
Signal peptidase I; Belongs to the peptidase S26 family.
       0.674
KXT77291.1
Trans-2,cis-3-Decenoyl-ACP isomerase.
   
 
 0.605
KXT77457.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
  0.592
KXT78964.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
    
 0.533
KXT77680.1
Alpha-galactosidase.
    
  0.492
birA
Biotin-protein ligase / Biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.456
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.424
Your Current Organism:
Streptococcus sp. DD13
NCBI taxonomy Id: 1777881
Other names: S. sp. DD13
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