Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBJ75744.1 | OBJ75884.1 | A9W97_08970 | A9W97_08965 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
OBJ75744.1 | OBJ75885.1 | A9W97_08970 | A9W97_08975 | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
OBJ75884.1 | OBJ75744.1 | A9W97_08965 | A9W97_08970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.644 |
OBJ75884.1 | OBJ75885.1 | A9W97_08965 | A9W97_08975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
OBJ75884.1 | OBJ82529.1 | A9W97_08965 | A9W97_23765 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Contains 3'-5'exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
OBJ75884.1 | OBJ86071.1 | A9W97_08965 | A9W97_18675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
OBJ75884.1 | OBJ91253.1 | A9W97_08965 | A9W97_12305 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.430 |
OBJ75884.1 | trmB | A9W97_08965 | A9W97_06170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.553 |
OBJ75885.1 | OBJ75744.1 | A9W97_08975 | A9W97_08970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
OBJ75885.1 | OBJ75884.1 | A9W97_08975 | A9W97_08965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
OBJ82529.1 | OBJ75884.1 | A9W97_23765 | A9W97_08965 | Hypothetical protein; Contains 3'-5'exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
OBJ86071.1 | OBJ75884.1 | A9W97_18675 | A9W97_08965 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
OBJ91253.1 | OBJ75884.1 | A9W97_12305 | A9W97_08965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
trmB | OBJ75884.1 | A9W97_06170 | A9W97_08965 | tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |