STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBJ90275.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (305 aa)    
Predicted Functional Partners:
OBJ85986.1
Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
  
  
0.919
OBJ80760.1
citryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.912
OBJ85985.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.814
OBJ77169.1
Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.808
OBJ76623.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.778
OBJ75291.1
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.721
OBJ90543.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.705
A9W97_13710
LLM class F420-dependent oxidoreductase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.700
OBJ82656.1
Carbamoyl-phosphate-synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.658
OBJ82619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.635
Your Current Organism:
Mycobacterium gordonae
NCBI taxonomy Id: 1778
Other names: ATCC 14470, CCUG 21801, CCUG 21811, CIP 104529, DSM 44160, JCM 6382, M. gordonae, NCTC 10267
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.