STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT72634.1Hypothetical protein. (641 aa)    
Predicted Functional Partners:
GAT72632.1
Polysaccharide ABC superfamily ATP binding cassette transporter.
 
   
 0.833
wzt
Polysaccharide ABC superfamily ATP binding cassette transporter ABC protein.
 
   
 0.823
ycbB
Dolichyl-phosphate mannose synthase.
 
   
 0.810
GAT72636.1
Hypothetical protein.
 
     0.791
GAT72637.1
Glycosyltransferase 4-like domain protein.
 
     0.753
GAT72659.1
Glycosyltransferase.
 
     0.597
GAT72654.1
UDP-galactopyranose mutase.
 
   
 0.583
GAT72631.1
Hypothetical protein.
       0.548
GAT72658.1
Glycosyltransferase.
 
     0.513
GAT74302.1
dTDP-4-dehydrorhamnose reductase.
 
     0.453
Your Current Organism:
Microbacterium sp. HM582
NCBI taxonomy Id: 1778770
Other names: M. sp. HM58-2, Microbacterium sp. HM58-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.