STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT73007.1Ribonuclease HII. (220 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit.
  
 
 0.932
GAT73006.1
Signal peptidase I.
 
    0.918
GAT74511.1
Ribonuclease H.
   
 
 0.840
GAT72942.1
Topoisomerase IB.
    
 
 0.819
polA
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
 
 0.767
acpP
Acyl carrier protein.
  
 
 0.767
thyA
Thymidylate synthase.
  
 
 0.765
GAT73008.1
Protein of unknown function; DUF2469.
       0.744
GAT74799.1
Hypothetical protein.
   
   0.709
rplS
50S ribosomal protein L19.
 
   
 0.703
Your Current Organism:
Microbacterium sp. HM582
NCBI taxonomy Id: 1778770
Other names: M. sp. HM58-2, Microbacterium sp. HM58-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.