STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT73962.1Nitroreductase. (183 aa)    
Predicted Functional Partners:
GAT73199.1
uroporphyrin-III C-methyltransferase.
  
 
 0.840
GAT73963.1
Oxidoreductase.
  
    0.804
GAT72357.1
Adenylyltransferase ThiF.
    
 0.717
GAT74232.1
Dinucleotide-utilizing enzyme.
    
 0.717
GAT74353.1
2,4-dienoyl-CoA reductase.
 
 
 0.655
GAT73966.1
Hypothetical protein.
 
     0.636
GAT73153.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.618
GAT72386.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1.
  
 
 0.611
GAT72582.1
Histidinol dehydrogenase; Precursor.
  
     0.609
GAT73965.1
Protein of unknown function; DUF3263.
       0.596
Your Current Organism:
Microbacterium sp. HM582
NCBI taxonomy Id: 1778770
Other names: M. sp. HM58-2, Microbacterium sp. HM58-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.