STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT74244.1Transcriptional regulator, LacI family. (333 aa)    
Predicted Functional Partners:
GAT74175.1
Arabinose metabolism transcriptional repressor AraR.
  
     0.761
GAT73153.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.706
GAT74165.1
Transcriptional regulator.
  
     0.690
GAT74245.1
Extracellular solute-binding protein family 1.
 
  
  0.621
GAT74246.1
ABC transporter inner membrane protein.
    
  0.486
GAT74247.1
ABC transporter inner membrane protein.
    
  0.484
GAT74721.1
HPr family phosphocarrier protein.
    
   0.438
GAT74900.1
Phosphotransferase system, HPr-related protein.
    
   0.438
guaA
GMP synthase.
    
   0.433
ribA-2
3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
   0.433
Your Current Organism:
Microbacterium sp. HM582
NCBI taxonomy Id: 1778770
Other names: M. sp. HM58-2, Microbacterium sp. HM58-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.