STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT74274.1Hypothetical membrane protein. (706 aa)    
Predicted Functional Partners:
GAT74275.1
Membrane-flanked domain DUF304.
 
  
 0.982
GAT74276.1
Hypothetical protein.
 
     0.871
GAT74273.1
Hypothetical protein.
 
     0.865
GAT74281.1
Cell division protein FtsH.
  
    0.845
GAT74278.1
Dihydroneopterin aldolase.
       0.825
GAT74279.1
Dihydropteroate synthase.
       0.825
folE
GTP cyclohydrolase I.
       0.825
GAT74277.1
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
       0.817
GAT74282.1
Hypoxanthine phosphoribosyltransferase.
       0.658
GAT74748.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component.
  
    0.595
Your Current Organism:
Microbacterium sp. HM582
NCBI taxonomy Id: 1778770
Other names: M. sp. HM58-2, Microbacterium sp. HM58-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.