STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl19e50S ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (157 aa)    
Predicted Functional Partners:
rpl1
50S ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release.
  
 0.999
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 0.999
rpl13e
50S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
  
 0.999
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
 0.999
rpl14e
50S ribosomal protein L14; Belongs to the eukaryotic ribosomal protein eL14 family.
  
 0.999
rps9
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 0.999
rpl30e
Hypothetical protein; Belongs to the eukaryotic ribosomal protein eL30 family.
  
 0.999
rpl44e
50S ribosomal protein L44E; Binds to the 23S rRNA.
   
 0.999
KYH36924.1
50S ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
Your Current Organism:
Bathyarchaeota archaeon B25
NCBI taxonomy Id: 1779369
Other names: C. Bathyarchaeota archaeon B25, Candidatus Bathyarchaeota archaeon B25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.