node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCB32761.1 | OCB34518.1 | A5676_04525 | A5676_01825 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
OCB34517.1 | OCB34518.1 | A5676_01820 | A5676_01825 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
OCB34517.1 | OCB34519.1 | A5676_01820 | A5676_01830 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
OCB34517.1 | OCB34520.1 | A5676_01820 | A5676_01835 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.497 |
OCB34517.1 | OCB37243.1 | A5676_01820 | A5676_18205 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. | 0.875 |
OCB34517.1 | OCB40476.1 | A5676_01820 | A5676_11205 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Contains 3'-5'exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.818 |
OCB34517.1 | recA | A5676_01820 | A5676_25625 | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.841 |
OCB34518.1 | OCB32761.1 | A5676_01825 | A5676_04525 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
OCB34518.1 | OCB34517.1 | A5676_01825 | A5676_01820 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
OCB34518.1 | OCB34519.1 | A5676_01825 | A5676_01830 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.819 |
OCB34518.1 | OCB34520.1 | A5676_01825 | A5676_01835 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
OCB34518.1 | OCB35524.1 | A5676_01825 | A5676_23705 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
OCB34518.1 | OCB37243.1 | A5676_01825 | A5676_18205 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family. | 0.756 |
OCB34518.1 | OCB40476.1 | A5676_01825 | A5676_11205 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Contains 3'-5'exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
OCB34518.1 | mutM | A5676_01825 | A5676_07820 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.461 |
OCB34518.1 | radA | A5676_01825 | A5676_03820 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.730 |
OCB34518.1 | recA | A5676_01825 | A5676_25625 | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.536 |
OCB34519.1 | OCB34517.1 | A5676_01830 | A5676_01820 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
OCB34519.1 | OCB34518.1 | A5676_01830 | A5676_01825 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.819 |
OCB34519.1 | OCB34520.1 | A5676_01830 | A5676_01835 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |