Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A5676_02335GTP-binding protein TypA; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
OCB34377.1
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OCB34378.1
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
OCB34376.1
Nitrate reductase molybdenum cofactor assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
OCB37111.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.838
OCB32697.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
OCB40064.1
Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
OCB40059.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.834
OCB38421.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.832
OCB38422.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.825
OCB37328.1
uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.718
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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