Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OCB33637.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
OCB33638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.889
OCB32223.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.838
OCB33503.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.801
OCB38417.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.801
OCB33639.1
Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.762
OCB36485.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.742
arc
Hypothetical protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.
    
 0.727
OCB35284.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.718
OCB37370.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.717
OCB37371.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.717
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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