Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OCB32730.1Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (96 aa)    
Predicted Functional Partners:
OCB32731.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.958
OCB40466.1
Type VII secretion protein EsxU; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
 
 0.811
OCB38364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.804
OCB35689.1
Type VII secretion protein EsxB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.802
OCB35360.1
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.672
OCB39260.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.609
OCB32718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.557
OCB32138.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.525
OCB34910.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.520
OCB40444.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.502
Your Current Organism:
Mycobacterium malmoense
NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298
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