OCB32643.1 protein (Mycobacterium malmoense)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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[Homology]

Score

OCB32643.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)

Predicted Functional Partners:

OCB32648.1

0.992

OCB32646.1

0.991

OCB32645.1

0.990

OCB40341.1

0.989

OCB32647.1

0.985

OCB32649.1

0.984

OCB32644.1

0.982

OCB32650.1

0.968

OCB31586.1

0.925

OCB32265.1

0.922

Your Current Organism:

Mycobacterium malmoense

NCBI taxonomy Id: 1780
Other names: ATCC 29571, CCUG 37761, CIP 105775, DSM 44163, JCM 13391, M. malmoense, NCTC 11298

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OCB31586.1	OCB32643.1	A5676_07405	A5676_05095	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
OCB31586.1	OCB32644.1	A5676_07405	A5676_05100	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
OCB31586.1	OCB32645.1	A5676_07405	A5676_05105	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
OCB31586.1	OCB32646.1	A5676_07405	A5676_05110	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
OCB31586.1	OCB32647.1	A5676_07405	A5676_05115	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
OCB31586.1	OCB32648.1	A5676_07405	A5676_05120	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
OCB31586.1	OCB32649.1	A5676_07405	A5676_05125	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OCB31586.1	OCB40341.1	A5676_07405	A5676_11355	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
OCB32265.1	OCB32643.1	A5676_06035	A5676_05095	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
OCB32265.1	OCB32644.1	A5676_06035	A5676_05100	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
OCB32265.1	OCB32645.1	A5676_06035	A5676_05105	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
OCB32265.1	OCB32646.1	A5676_06035	A5676_05110	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
OCB32265.1	OCB32647.1	A5676_06035	A5676_05115	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
OCB32265.1	OCB32648.1	A5676_06035	A5676_05120	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
OCB32265.1	OCB32649.1	A5676_06035	A5676_05125	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
OCB32265.1	OCB40341.1	A5676_06035	A5676_11355	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
OCB32643.1	OCB31586.1	A5676_05095	A5676_07405	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
OCB32643.1	OCB32265.1	A5676_05095	A5676_06035	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
OCB32643.1	OCB32644.1	A5676_05095	A5676_05100	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
OCB32643.1	OCB32645.1	A5676_05095	A5676_05105	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MCE-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990

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